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Is the effect similar with the functioning j-pouch? I don't recall this being such an issue with the end ostomy.
I did have this issue in my first year or two with the J Pouch. It is called "spasmodic bowel" or "spasmodic pouch." The problem was in the short term completely eliminated by taking anti-spasmodics like bentyl or levsin about 45 minutes before eating. These drugs basically calm peristalsis down so that the bowel does not spasm when food goes down the pipe.
After a year or two, my pouch "settled down" and I did not need to take the anti-spasmodics on any kind of regular basis.
I would note that bentyl and levsin had some side effects of making me feel a little loopy. I found that donnatal was as effective with less side effects. However as of about 6 months ago I was unable to refill a prescription of donnatal and my understanding is that it was either temporarily or permanently taken off the market. In any event I now have an active prescription for levsin, but I only take it at bedtime, or as needed if I feel like the pouch is spasmodic - which is rare.
If you should need it, which we don't even know if you will, take it about 45 minutes before meals and it should resolve any such issue.